Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4147369	4147671	303	42 [0]	[0] 54	tsgA	predicted transporter

CGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAC  >  W3110S.gb/4147307‑4147368                                                              | cGAAGGTCAGAATAAAAATAGCGACATCCACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:197549/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAACCCCAGTACCAc  <  1:711146/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:62038/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1496575/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1053044/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:251964/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:258096/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:344465/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:378261/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:390810/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:553568/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1544290/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:661763/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:688981/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:714713/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:739817/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:779280/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:830638/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:964392/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:999794/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:138502/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:106415/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1075189/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1089879/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1093205/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:115910/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1220982/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1237296/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1279321/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1300880/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1303871/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1318814/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1328248/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1340392/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1357/62‑1 (MQ=255) cGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1476475/62‑1 (MQ=255)  gAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1283289/61‑1 (MQ=255)  gAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:631005/61‑1 (MQ=255)  gAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:265714/61‑1 (MQ=255)  gAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:969235/61‑1 (MQ=255)   aaGGTCAGAATAAAAATAGCGACATACTCCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1257621/60‑1 (MQ=255)                       gACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAc  <  1:1351370/40‑1 (MQ=255)                                                              | CGAAGGTCAGAATAAAAATAGCGACATACACCAGCCCGATGCAGGCATAAACCCAGTACCAC  >  W3110S.gb/4147307‑4147368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑