Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4148250	4149345	1096	46 [0]	[0] 22	[ppiA]–[fic]	[ppiA],yhfG,[fic]

TGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAG  >  W3110S.gb/4148188‑4148249                                                              | tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:575406/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1030743/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1528668/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1543981/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1603494/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1637642/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:169609/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:299788/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:3446/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:447369/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:565142/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:575210/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1518919/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:652383/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:658667/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:69776/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:772389/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:789485/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:795547/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:817327/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:85092/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:89258/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:899371/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1483013/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1103994/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1218138/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1227342/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1252651/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1266865/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1284451/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1284524/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1331456/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1333782/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1340621/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1340723/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1355453/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1363674/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1396862/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1427554/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1443994/62‑1 (MQ=255) tGGCAGCGAAAGGGGACCCCCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1085831/62‑1 (MQ=255)  ggCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:470816/61‑1 (MQ=255)  ggCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1372013/61‑1 (MQ=255)   gCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1431953/60‑1 (MQ=255)                aCCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1502487/47‑1 (MQ=255)                   cGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAg  <  1:1139134/44‑1 (MQ=255)                                                              | TGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAG  >  W3110S.gb/4148188‑4148249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑