Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4174882	4174968	87	79 [0]	[0] 117	gspM	general secretory pathway component, cryptic

TAATCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTATTGT  >  W3110S.gb/4174826‑4174881                                                        | taatCTGTAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1634323/1‑56 (MQ=255) taatCTGCAATAAACCCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:155323/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:432298/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:679589/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:677869/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:648292/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:634362/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:626695/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:478687/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:463365/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:434504/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:697153/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:425223/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:401850/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:398531/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:397219/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:396512/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:38649/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:314231/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:225091/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:826199/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:970675/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:947499/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:935847/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:869478/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:86463/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:863432/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:849635/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:847428/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:827328/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:210534/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:816944/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:808436/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:801232/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:782290/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:763690/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:731927/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:729212/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:710582/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:70705/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1212151/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1339798/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:132943/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1299203/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1297668/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1292283/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1291828/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1286408/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1225620/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1223498/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1341446/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1180610/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1177217/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1171688/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1114121/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1060921/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1043032/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1040862/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1027950/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1023442/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:149739/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1002080/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:208384/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:168698/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1648847/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1647249/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1642291/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1597377/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1590631/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1553475/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:214446/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1495321/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1453664/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1430351/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1420606/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1416969/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:140409/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTAttgt  >  1:1373459/1‑56 (MQ=255) taatCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCACTGTCATTAttgt  >  1:496698/1‑56 (MQ=255)                                                        | TAATCTGCAATAAAACCAACCAGAATGAAGAGCGGCAGTAGCATTGTCATTATTGT  >  W3110S.gb/4174826‑4174881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑