Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4178275	4178290	16	96 [0]	[0] 38	gspI	general secretory pathway component, cryptic

TCTTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCT  >  W3110S.gb/4178233‑4178274                                          | tctTTGCCAGAACTTGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1170267/1‑42 (MQ=255) tctTTGCCAGAACTGGTCGTGTTTTCCTCGCCGAATGAATCt  >  1:1245775/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:428779/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:655296/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:651200/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:597685/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:573651/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:549987/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:547173/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:540002/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:521911/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:456094/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:442195/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:432053/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:681658/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:417088/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:414877/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:408583/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:406634/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:372088/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:34363/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:338374/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:315398/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:313850/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:307434/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:305335/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:835046/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:98526/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:976955/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:964048/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:957343/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:931917/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:902252/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:901646/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:885100/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:88089/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:845654/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:839413/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:680202/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:831944/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:829821/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:798618/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:784946/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:783505/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:731613/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:719162/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:71290/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:705293/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:260911/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1219658/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1375432/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1370418/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1363398/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1354657/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1344253/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1326913/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1284012/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1261428/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1259285/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1241616/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1225163/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1376885/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:120764/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1197329/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1188020/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1174777/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1165348/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1093736/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1072409/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1057418/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1039985/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1020434/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:154040/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:25634/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:242519/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:205454/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:187431/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:163767/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1617656/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1600153/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:156374/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1550204/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1012423/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1525247/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1503521/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1488537/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1469151/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1462848/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:146202/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1459057/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1454884/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:14260/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1416761/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCt  >  1:1387233/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGGTTTCCTCGCCGAATGAATCt  >  1:343252/1‑42 (MQ=255) tctTTGCCAGAACTGGACGTGGTTTCCTCGCCGAATGAATCt  >  1:108883/1‑42 (MQ=255)                                          | TCTTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCT  >  W3110S.gb/4178233‑4178274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑