Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4178801	4178819	19	64 [0]	[0] 13	gspH	predicted general secretory pathway component, cryptic

AGAGAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAG  >  W3110S.gb/4178741‑4178800                                                            | agagAAATGGATACCGACAGGCTGACCACTTAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:427671/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:532641/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:22424/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:241728/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:2480/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:256409/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:278262/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:360929/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:388125/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:403624/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:413556/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:427644/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:446663/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:482376/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:497468/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:523108/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:24099/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:538016/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:568112/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:583510/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:637617/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:658955/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:723481/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:741054/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:747881/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:777316/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:818417/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:936073/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:953987/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:984171/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:984653/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1358800/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1068263/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1119285/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1121064/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1128636/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1140985/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1143260/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:117248/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1202994/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1208962/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1216097/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1251950/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1302928/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1334020/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:133613/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:19062/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1431125/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1649179/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1632817/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:155506/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1547228/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1546977/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1480671/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1480165/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1469660/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1453842/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1443841/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1441557/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1440972/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1368966/1‑60 (MQ=255) agagAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATCGCTAATTCAAg  >  1:707725/1‑60 (MQ=255) agagAAATGGATACAGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:1019260/1‑60 (MQ=255) agagAAAGGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAg  >  1:877591/1‑60 (MQ=255)                                                            | AGAGAAATGGATACCGACAGGCTGACCACTGAGCGTGGCGCGGTCGATGGCTAATTCAAG  >  W3110S.gb/4178741‑4178800

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑