Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4179036	4179084	49	68 [2]	[0] 100	gspG	pseudopilin, cryptic, general secretion pathway

TCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAGCAGATCGTATGCACCATGTTCACC  >  W3110S.gb/4178975‑4179059                                                             |                         tCAAACCCCAGTTGGTGATTTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:786400/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:619203/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:344721/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:362216/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:389121/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:403001/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:41640/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:427027/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:453654/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:46508/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:510873/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:517450/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:534991/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:544862/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:584557/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:59077/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1039021/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:628634/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:684228/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:69397/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:739245/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:742563/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:807177/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:825345/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:841193/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:870313/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:875226/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:885755/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:890733/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:933793/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1435769/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1164988/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1147031/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1231880/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1082786/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1268210/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:127424/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1078299/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1291395/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1330680/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1383643/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1408470/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1435063/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1449251/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:170277/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:245852/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:231726/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:224129/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:208720/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:206864/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:182254/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:172166/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1570640/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1000077/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1611588/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1064916/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGCGCCCTGCTGAAAg                          <  1:67181/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCCTCGGTACCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:767145/61‑1 (MQ=255) tCAAACCCCAGTTGGTGATGTCGTCATCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:1305901/61‑1 (MQ=255) tCAAACCACAGTTGGTGATGTCGTCCTCGGTTCTCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:526509/61‑1 (MQ=255)      ccccAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:237239/56‑1 (MQ=255)       cccAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:521658/55‑1 (MQ=255)           gTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:912895/51‑1 (MQ=255)                tGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:836612/46‑1 (MQ=255)                      cgtcCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAg                          <  1:95953/40‑1 (MQ=255)                        tcCTCGGTTCCCATTTCACCATCTGGCCCTGCTGAAAg                          <  1:128275/38‑1 (MQ=255)                         ccTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAGCAGATCGTATGCACCATGTTCAcc  <  1:821774/61‑1 (MQ=255)                         ccTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAGCAGATCGTATGCACCATGTTCAcc  <  1:1624177/61‑1 (MQ=255)                                                             |                         TCAAACCCCAGTTGGTGATGTCGTCCTCGGTTCCCATTTCACCATCGGGCCCTGCTGAAAGCAGATCGTATGCACCATGTTCACC  >  W3110S.gb/4178975‑4179059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑