Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4224413	4224487	75	78 [0]	[0] 13	arpA	regulator of acetyl CoA synthetase

CCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTA  >  W3110S.gb/4224351‑4224412                                                              | ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:431946/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:635239/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:60341/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:581742/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:579139/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:539220/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:496850/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:490408/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:481635/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:472158/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:636244/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:396786/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:3669/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:325031/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:316684/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:30297/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:296547/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:279381/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:277570/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1006435/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:83057/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:979504/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:967881/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:957596/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:950691/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:936556/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:897171/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:863041/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:855716/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:834618/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:242056/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:81146/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:797688/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:766624/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:759173/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:691215/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:686528/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:668712/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:654313/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1169917/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1313187/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:130910/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:12921/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1286914/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1280368/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1271215/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1227836/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:119680/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1184376/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1330150/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1166927/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1164839/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:11162/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1098738/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1033886/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1031654/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1025056/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1023944/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1494248/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:212699/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1649153/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1625061/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1600306/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1564057/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1510800/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1508447/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:227256/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1471223/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1456977/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1433844/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1399859/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1393760/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1367103/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1351271/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:135079/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTAAAATATCGGAAGCTGAAATGTTa  >  1:159206/1‑62 (MQ=255) ccGTGTCGCGCGCAAGACTTTTAGCAGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:1505828/1‑62 (MQ=255) ccGTGTCGCGCACAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTa  >  1:723824/1‑62 (MQ=255)                                                              | CCGTGTCGCGCGCAAGACTTTTAGCGGTCAGAAGATCTACAATATCGGAAGCTGAAATGTTA  >  W3110S.gb/4224351‑4224412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑