Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4408113	4408188	76	43 [0]	[1] 75	hflC	modulator for HflB protease specific for phage lambda cII repressor

AAAGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGACAACAA  >  W3110S.gb/4408051‑4408112                                                              | aaaGAAGGTGAGCGCTGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:836407/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:677691/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:333999/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:355282/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:385624/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:38670/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:394416/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:444180/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:453689/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:4656/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:566694/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:606397/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:311295/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:688612/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:724318/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:726325/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:766686/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:792697/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:80433/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:843884/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:874803/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:982392/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1590343/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1109359/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1121791/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1139945/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1172305/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1360838/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1393419/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1432239/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:146576/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1505590/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1560013/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1022809/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1603062/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1621092/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1636848/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:1650097/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:187781/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:210112/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:277812/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:286488/1‑62 (MQ=255) aaaGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGAcaacaa  >  1:307577/1‑62 (MQ=255)                                                              | AAAGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGACAACAA  >  W3110S.gb/4408051‑4408112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑