Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4550997	4551376	380	29 [0]	[0] 96	fimD	outer membrane usher protein, type 1 fimbrial synthesis

AATGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTG  >  W3110S.gb/4550936‑4550996                                                             | aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTGCggctg  <  1:292284/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:289056/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:97908/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:915792/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:881471/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:696285/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:679432/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:634421/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:605610/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:593951/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:487655/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:474721/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:1114270/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:246473/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:1646998/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:1633397/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:1601943/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:1494535/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:1474466/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:1442718/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:1429295/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:1408778/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:1247730/61‑1 (MQ=255) aaTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:1199501/61‑1 (MQ=255)  aTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:422428/60‑1 (MQ=255)  aTGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:1523092/60‑1 (MQ=255)                aaaaCCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:552152/46‑1 (MQ=255)                         tttttCCTGAGTACATTACTCCACGGCCTTCCggctg  <  1:188542/37‑1 (MQ=255)                         tttttCCAGAGTACATTACTCCACGGCCTTCCggctg  <  1:565902/37‑1 (MQ=255)                                                             | AATGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTG  >  W3110S.gb/4550936‑4550996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑