Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 4551439 4551503 65 101 [0] [0] 76 fimD outer membrane usher protein, type 1 fimbrial synthesis

Only 100 of 101 total aligned reads displayed.

ACTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGG  >  W3110S.gb/4551377‑4551438
                                                             |
aCTCAGCTACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:215990/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATTAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1551616/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTTAGTGGTAGCCATCAAACTTATTgggg  <  1:972156/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgtgg  <  1:1179229/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:348109/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:60978/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:585852/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:576800/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:544635/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:541122/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:535673/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:497633/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:482933/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:472946/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:451531/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:441355/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:425774/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:638511/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:261470/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:24926/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:243985/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:234082/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:22919/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:202137/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:190679/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:187963/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:800907/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:985602/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:98512/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:96852/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:959116/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:946590/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:924488/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:91658/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:885124/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:874136/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:865086/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:819743/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:632302/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:792876/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:742073/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:731465/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:717323/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:679225/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:676610/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:675458/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:668443/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:666978/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:66047/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1061366/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1259689/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1450472/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1448705/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1399201/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1395598/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1384923/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:138492/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1381582/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1356174/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1350028/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1312709/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1307761/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:176573/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1255950/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1231122/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1204355/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1199717/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1193480/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1170988/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1146343/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1114960/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1083977/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1064971/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1049941/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1525767/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1626784/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:160216/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1598671/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1579599/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:157051/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1569001/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1549201/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:175438/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1527669/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:176718/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1520324/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:151587/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1510944/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1507100/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1496359/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:148270/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:145090/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1465444/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1459132/62‑1 (MQ=255)
aCTCAGCAACTCGGGCGCACATCAACACTCTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1639193/62‑1 (MQ=255)
 cTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:992009/61‑1 (MQ=255)
 cTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1543944/61‑1 (MQ=255)
         cTCGGGCGCACATCAACACTGTATTTGAGTTGTAGCCATCAAACTTATTgggg  <  1:1465485/53‑1 (MQ=255)
          tCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:1230630/52‑1 (MQ=255)
          tCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTgggg  <  1:766508/52‑1 (MQ=255)
                                                             |
ACTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGG  >  W3110S.gb/4551377‑4551438

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑