Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	337884	338078	195	66 [0]	[0] 127	yahG	conserved hypothetical protein

ACGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTGCGG  >  W3110S.gb/337828‑337883                                                        | aCGGCGAAAACCATTCTTCATGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1542377/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:563262/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1001532/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:231014/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:231928/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:27406/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:282698/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:34843/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:367307/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:378602/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:417864/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:439471/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:470148/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:501760/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:522683/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:55495/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:209923/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:575037/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:645095/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:728587/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:792176/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:817422/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:820646/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:822873/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:825810/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:844332/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:87318/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:902160/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:942938/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:943984/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:948345/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:996646/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1371798/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1013092/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1034657/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1044874/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1074385/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:10828/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1103385/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:118882/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1199504/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1280305/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1305704/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1308706/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:135163/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1363921/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:194428/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1377650/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1406491/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1437303/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1488826/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1514009/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:184448/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1581403/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1594228/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1618327/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1620251/56‑1 (MQ=255) aCGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1629360/56‑1 (MQ=255)  cGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:633670/55‑1 (MQ=255)  cGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1499894/55‑1 (MQ=255)  cGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1108354/55‑1 (MQ=255)   ggCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1418323/54‑1 (MQ=255)        aaaCCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:498443/49‑1 (MQ=255)             aTTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:191678/44‑1 (MQ=255)                 ttcACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:1576360/40‑1 (MQ=255)                 ttcACGCCGGGCCGCCGATCACCTGGGAAAAAATGTgcgg  <  1:637397/40‑1 (MQ=255)                                                        | ACGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTGCGG  >  W3110S.gb/337828‑337883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑