Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	554067	554077	11	64 [0]	[0] 108	cysS	cysteinyl‑tRNA synthetase

CTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACGCGC  >  W3110S.gb/554007‑554066                                                            | cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGCCGACAAAATCATCAAACgcgc  <  1:1023306/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:602225/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:26448/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:584801/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:555086/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:552053/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:550216/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:528807/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:528428/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:522770/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:446834/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:423482/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:405552/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:309533/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:308395/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:287659/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:971486/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:641038/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:643384/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:646314/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:647096/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:668866/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:741526/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:744371/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:785007/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:78858/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:831449/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:869996/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:89219/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:926929/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:933157/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1006974/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1312145/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1050715/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1066356/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1079069/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1128293/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1154001/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1173947/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1205015/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1205886/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1207020/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1254285/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1276482/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1277521/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1302621/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:164709/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1512477/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1627424/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1622949/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1618640/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1613089/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1608975/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1605224/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1592123/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1522540/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1379320/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1471053/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1438192/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1436287/60‑1 (MQ=255) cTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1409523/60‑1 (MQ=255)  tataAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:141262/59‑1 (MQ=255)                       aaCATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:738325/38‑1 (MQ=255)                        aCATTACCGATATCGACGACAAAATCATCAAACgcgc  <  1:1287968/37‑1 (MQ=255)                                                            | CTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACGCGC  >  W3110S.gb/554007‑554066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑