Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	577855	577977	123	64 [0]	[1] 114	borD	predicted lipoprotein

GCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCG  >  W3110S.gb/577793‑577854                                                              | gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:655354/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:317226/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:101437/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:343230/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:384751/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:404273/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:429392/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:435367/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:452957/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:506729/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:574272/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:574535/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:582323/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:592231/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:618323/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:645599/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:327029/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:713864/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:714113/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:723465/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:732674/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:749357/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:819068/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:829700/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:84710/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:853985/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:860389/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:916849/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:932581/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:958930/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:987042/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1169880/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:144552/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1396542/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1362156/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1346672/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1304400/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1269022/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1248698/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1246757/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:296113/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1114916/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1090543/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1073029/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:106863/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1034614/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1021528/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1019721/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1539000/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1578621/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1620664/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:163363/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1638194/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1649769/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:177058/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:177910/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:25178/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:256500/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:264193/62‑1 (MQ=255) gCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:298124/62‑1 (MQ=255)  cTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:519379/61‑1 (MQ=255)  cTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:489904/61‑1 (MQ=255)            cGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:61865/51‑1 (MQ=255)                     aCTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCg  <  1:1650015/42‑1 (MQ=255)                                                              | GCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCG  >  W3110S.gb/577793‑577854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑