Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	687730	689770	2041	46 [0]	[0] 73	[gltI]–[lnt]	[gltI],insH,[lnt]

CAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCAAAA  >  W3110S.gb/687669‑687729                                                             | cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:470444/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1516668/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:159140/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1644729/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:254148/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:274269/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:296128/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:296132/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:382192/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:454684/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:458927/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1027811/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:482560/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:601486/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:641549/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:671765/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:672448/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:728951/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:778508/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:894140/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:977226/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1241575/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1025685/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1054009/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1084324/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:108716/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1098779/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1161159/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1165309/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1173469/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1483746/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1269640/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1318229/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1338964/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1349337/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1427875/61‑1 (MQ=255) cAAAACTTCAGAGGTAGTGCCGGAAGTGAAGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:961283/61‑1 (MQ=255)  aaaaCTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1170171/60‑1 (MQ=255)  aaaaCTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1070336/60‑1 (MQ=255)  aaaaCTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:924117/60‑1 (MQ=255)             ggTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:345049/49‑1 (MQ=255)                    ccGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1331767/42‑1 (MQ=255)                       gAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1345339/39‑1 (MQ=255)                        aaGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1638488/38‑1 (MQ=255)                        aaGTGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:160498/38‑1 (MQ=255)                           tGACGACTACGGCTTTGTCTTTCAGGTTGGCaaaa  <  1:1304079/35‑1 (MQ=255)                                                             | CAAAACTTCAGAGGTAGTGCCGGAAGTGACGACTACGGCTTTGTCTTTCAGGTTGGCAAAA  >  W3110S.gb/687669‑687729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑