Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	849781	850849	1069	75 [0]	[0] 89	[rhtA]	[rhtA]

CAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCG  >  W3110S.gb/849719‑849780                                                              | cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:524089/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:716677/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:655164/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:630168/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:622848/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:609850/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:584029/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:562965/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:52877/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:731130/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:514826/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:489005/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:453802/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:336679/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:336013/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:334122/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1016/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:282754/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:865095/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:998904/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:992802/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:979524/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:959111/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:909776/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:879950/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:867117/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:867046/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:287107/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:803696/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:791638/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:752590/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:751947/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:748049/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:745350/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:741556/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1128539/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1397796/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:26705/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1343244/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1338022/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1296443/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1219603/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1216144/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1200888/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1365425/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1090309/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1087175/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1085277/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1071637/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1056560/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:102413/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1021307/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1431129/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:236138/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1648946/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1646865/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1588039/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1586236/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1569874/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1554682/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1531994/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1477725/62‑1 (MQ=255) cAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:141399/62‑1 (MQ=255)  aGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1228951/61‑1 (MQ=255)  aGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:122098/61‑1 (MQ=255)  aGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1565005/61‑1 (MQ=255)  aGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:472372/61‑1 (MQ=255)  aGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:472322/61‑1 (MQ=255)  aGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:739120/61‑1 (MQ=255)  aGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1114261/61‑1 (MQ=255)  aGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:451044/61‑1 (MQ=255)  aGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:39378/61‑1 (MQ=255)  aGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1501198/61‑1 (MQ=255)  aGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1377641/61‑1 (MQ=255)                    aGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAgcg  <  1:1316767/43‑1 (MQ=255)                                                              | CAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCG  >  W3110S.gb/849719‑849780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑