Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1041636	1041636	1	44 [0]	[0] 6	appA	phosphoanhydride phosphorylase

GGCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTTG  >  W3110S.gb/1041574‑1041635                                                              | ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:590580/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1002056/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:176029/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:19206/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:98088/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:326343/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:383558/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:5220/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:531783/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:538070/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1595667/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:644845/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:676497/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:678999/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:92164/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:771855/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:794119/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:814193/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:89769/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:903260/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1225690/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1017167/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1051720/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1068171/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:107920/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1110667/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1115164/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1118773/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1121774/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1162345/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1214523/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1257173/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1352827/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1376277/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1399298/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1443053/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:150031/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1536425/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:1564651/62‑1 (MQ=255) ggCATCGGCAAACGGCGTTTCGCGAACTCGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:159621/62‑1 (MQ=255)   cATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:994982/60‑1 (MQ=255)          aaaCGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:728539/53‑1 (MQ=255)           aaCGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:166027/52‑1 (MQ=255)                           cTGGAACGGGTGCTTAATTTTCCGCAATCAAACTtg  <  1:290778/36‑1 (MQ=255)                                                              | GGCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTTG  >  W3110S.gb/1041574‑1041635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑