Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1110313	1110423	111	87 [0]	[0] 55	mdoC	membrane protein required for modification of periplasmic glucan

GTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAG  >  W3110S.gb/1110251‑1110312                                                              | gTTTGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:10831/62‑1 (MQ=255) gTTCGCCACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1497377/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:214390/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:392372/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:388849/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:343178/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:333436/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:328017/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:3007/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:291809/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:269859/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:240544/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:238310/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:393071/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1628006/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:160372/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1600710/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1596021/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1595573/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1561833/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1004610/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1550382/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:591774/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:949246/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:934995/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:878533/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:849399/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:848814/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:797821/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:739036/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:660132/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:619162/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1554012/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:58048/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:564132/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:538174/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:525440/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:50652/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:501581/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:430163/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:415902/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:412746/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:114329/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1256546/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1248458/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1535359/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1242226/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1201944/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1196497/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1174498/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1163225/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1160865/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1246692/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1102007/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1078381/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1076725/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1074074/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:105371/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1052084/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1024905/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1015392/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1286503/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1326558/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1356682/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1371265/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1277871/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1372570/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1483538/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:147210/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1373003/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1472065/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1378068/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1383404/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1466579/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1458595/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1388768/62‑1 (MQ=255) gTTCGACACGTACTTTCCACCATTCTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1508248/62‑1 (MQ=255)  ttCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:632623/61‑1 (MQ=255)  ttCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1376057/61‑1 (MQ=255)  ttCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:122878/61‑1 (MQ=255)   tCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:608995/60‑1 (MQ=255)    cGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1610233/59‑1 (MQ=255)        acGTACTTTCGACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:112683/55‑1 (MQ=255)                tCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:284973/47‑1 (MQ=255)                     caTTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:770676/42‑1 (MQ=255)                     caTTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:521555/42‑1 (MQ=255)                      aTTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAg  <  1:1046732/41‑1 (MQ=255)                                                              | GTTCGACACGTACTTTCCACCATTTTTTCAAGGGATAGCGTAAAAAAAGCATGTAGGAAAAG  >  W3110S.gb/1110251‑1110312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑