Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1127496	1127598	103	53 [0]	[0] 116	rimJ	ribosomal‑protein‑S5‑alanine N‑acetyltransferase

TGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGA  >  W3110S.gb/1127435‑1127495                                                             | tGGGTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:480829/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGTTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1349996/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTCTCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:451363/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:739805/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:370759/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:374612/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:400996/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:423574/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:447427/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:498076/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:637857/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:667582/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:685930/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:703380/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1047265/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:747915/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:771430/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:781111/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:812484/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:826740/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:899330/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:905357/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:918396/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:919158/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:94696/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:969403/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:347410/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:100299/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1070896/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:110864/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1141560/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1146623/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1204164/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:126214/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1288482/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1305631/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1316823/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1317278/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1431328/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1436402/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1487863/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1553917/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:1602389/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:170322/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:193903/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:243770/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:273557/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:28869/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:311658/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:33733/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:366683/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGACAAAAATGGCAGGGCAAAGGa  >  1:970718/1‑61 (MQ=255) tGGCTCTTTTCATGCCTGCTATCTCGGATATTCGATTGGGCAAAAATGGCAGGGCAAAGGa  >  1:842467/1‑61 (MQ=255)                                                             | TGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGA  >  W3110S.gb/1127435‑1127495

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑