Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1247615	1247724	110	45 [0]	[0] 9	treA	periplasmic trehalase

GTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCC  >  W3110S.gb/1247553‑1247614                                                              | gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCATCCATTTGGCGCATccc  >  1:662096/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:268191/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:224396/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:286515/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:3191/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:332170/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:406848/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:444686/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:444850/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:484035/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:492941/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:568004/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:643505/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:668853/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:732696/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:756608/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:797919/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:854933/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:868842/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:888180/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:891874/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:963125/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:967537/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1424138/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1020652/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1049100/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1189161/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1235973/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1259794/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1287668/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1300813/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1322113/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1417819/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1007763/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1463343/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1472865/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1511838/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1518399/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1536672/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1609183/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:1644805/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:183054/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:185015/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc  >  1:206737/1‑62 (MQ=255) gTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGAGCCCAGCCATTTGGCGCATccc  >  1:117809/1‑62 (MQ=255)                                                              | GTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCC  >  W3110S.gb/1247553‑1247614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑