Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1388153	1388253	101	77 [0]	[0] 57	ycjF	conserved inner membrane protein

CGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGA  >  W3110S.gb/1388092‑1388152                                                             | cGTTTGTCTACCCGCGCAGTTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1508052/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTTCAGGACTTCTGACGGCACGACTCGGGa  <  1:540213/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:488233/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:66604/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:602296/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:594657/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:574576/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:538949/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:526742/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:5252/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:678712/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:464468/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:463722/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:431060/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:422009/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:390047/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:359179/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:317805/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:288184/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:249568/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:822973/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:98642/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:921097/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:919340/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:914351/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:893167/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:893036/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:880515/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:860524/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:853712/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:213568/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:820126/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:779432/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:753094/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:716295/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:711485/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:708129/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:707057/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:702141/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1298618/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:213657/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1424000/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1355931/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1335272/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1328611/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1327773/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1326040/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1325340/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:131797/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1430633/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1242546/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1210480/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1157991/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1136933/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1117684/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1060630/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1034542/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1011500/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:15626/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:100558/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:162886/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1621787/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1621064/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1610453/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1605117/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1585712/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1573367/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1433024/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1553362/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1538429/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1519714/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1480357/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1468271/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1464780/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1442315/61‑1 (MQ=255) cGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTGCTGACGGCACGACTCGGGa  <  1:1212224/61‑1 (MQ=255)                          ggATTGGTGCAGGACTTCTGACGGCACGACTCGGGa  <  1:1516342/36‑1 (MQ=255)                                                             | CGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGA  >  W3110S.gb/1388092‑1388152

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑