Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1525110	1525820	711	66 [0]	[0] 45	yncE	conserved hypothetical protein

CGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGC  >  W3110S.gb/1525048‑1525109                                                              | cgcCTGCGTGGTTCATTACTGTTAGGTTCGTTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:543606/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:516096/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:593852/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:550226/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:531718/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:53078/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:530456/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:527058/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:523485/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:605601/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:51146/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:462610/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:43117/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:403906/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:393081/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:326430/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1038971/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:310006/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:642536/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:673213/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:684384/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:702886/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:708314/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:711911/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:735847/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:769731/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:782916/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:827926/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:834825/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:868558/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:879235/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:925087/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:949620/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1341898/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1043395/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1066130/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1084961/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1112077/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1112536/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1136510/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1146147/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1152908/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1169855/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1171129/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1179274/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1193021/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1228648/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:124480/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1292402/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1466721/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1599308/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1556158/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1549503/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1545500/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1538928/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1527271/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:151591/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1650858/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1454088/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1450024/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1438184/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1428211/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1399312/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:1343405/1‑62 (MQ=255) cgcCTGCGTGGTTCATTACTGTTAGGTTC‑TTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:123853/1‑61 (MQ=255) cgcCTGCGTGGTTCATTACTGATAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc  >  1:40065/1‑62 (MQ=255)                                                              | CGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGC  >  W3110S.gb/1525048‑1525109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑