Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1713199	1713302	104	69 [0]	[5] 61	[rsxE]–[nth]	[rsxE],[nth]

GCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCA  >  W3110S.gb/1713138‑1713198                                                             | tcTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:391109/60‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:662363/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:317651/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1019386/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:379123/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:42307/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:429067/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:461736/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:482512/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:569567/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:573472/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:581820/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:588101/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:598364/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:605384/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:657068/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:344880/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:676457/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:690734/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:792484/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:806510/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:83456/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:846656/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:875988/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:880550/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:89858/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:925975/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:933506/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:939812/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:941468/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:956493/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:999053/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1235401/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:313644/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1456003/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1415939/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1356015/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1272825/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1270694/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1264809/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1260230/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1468782/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1230070/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1225217/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1173255/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1149989/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:112214/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1100533/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1098625/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:31067/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:233008/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:212206/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:197635/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1560000/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:29747/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1555387/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1551787/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:152784/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1521932/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1494565/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1479759/61‑1 (MQ=255) gCTGGCAGGAAAATACCTGATTGAGGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:824802/61‑1 (MQ=255) gCTGGCAGGAAAATACCTCATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:604441/61‑1 (MQ=255)  cTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:637935/60‑1 (MQ=255)   tGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1491439/59‑1 (MQ=255)         gAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:545577/53‑1 (MQ=255)                      tgatgaAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:1233760/40‑1 (MQ=255)                      tgatgaAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:336285/40‑1 (MQ=255)                       gatgaAAGAATCAAAAAGCGCCGTGCTGAAGCAGCTGCa  <  1:831985/39‑1 (MQ=255)                                                             | GCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCA  >  W3110S.gb/1713138‑1713198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑