Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1799341	1800250	910	35 [0]	[0] 76	[pheT]–[pheS]	[pheT],[pheS]

TTCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGC  >  W3110S.gb/1799287‑1799340                                                      | ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:673838/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:509002/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:524062/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:528210/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:570909/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:611201/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:619736/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:6449/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:646505/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:379686/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:681085/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:689791/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:747429/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:769416/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:772180/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:802600/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:836604/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:920369/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:1544928/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:1128072/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:1162605/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:1185956/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:1281494/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:1308087/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:1325467/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:1394498/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:1401259/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:1015643/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:1556389/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:1580625/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:197188/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:269340/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:302366/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:325526/1‑54 (MQ=255) ttCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTcgccgc  >  1:333252/1‑54 (MQ=255)                                                      | TTCAGAGAAGGAGCACAGCATCCCTTCAGACGGTTCGCCACGCAGTTTCGCCGC  >  W3110S.gb/1799287‑1799340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑