Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1815627	1817020	1394	78 [0]	[0] 21	katE	hydroperoxidase HPII(III)

AAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCAC  >  W3110S.gb/1815566‑1815626                                                             | aaGGAGACGAGTTCTATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1088254/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCAGATCAGCACCAGTcaccac  >  1:373067/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:386327/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:583609/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:582400/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:547642/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:537663/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:5008/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:4891/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:488837/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:464636/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:45928/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:402208/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:584446/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:385447/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:348236/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:317271/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:275250/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:27194/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:251718/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:202907/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:820997/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:958440/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:952473/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:943441/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:92063/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:882478/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:877535/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:874373/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:868840/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:84890/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1649530/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:802750/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:798443/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:782928/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:740367/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:737666/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:678489/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:656833/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:625769/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1247408/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1003732/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1332541/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1329753/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1325461/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1318411/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1287924/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:127892/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1247830/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1369212/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1234354/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:122140/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1195356/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1194798/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1100793/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1088309/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1042323/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1035584/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1512070/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1639258/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1615448/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1610526/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1606839/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1598699/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:157021/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1546734/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1531124/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1376638/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1499535/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1472677/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1470256/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1427826/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1421850/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1385454/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCAACAGTcaccac  >  1:1321263/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACACACATCAGCACCAGTcaccac  >  1:1205442/1‑61 (MQ=255) aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAAACCACATCAGCACCAGTcaccac  >  1:1464207/1‑61 (MQ=255) aaGGAGACGACTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTcaccac  >  1:1413829/1‑61 (MQ=255)                                                             | AAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCAC  >  W3110S.gb/1815566‑1815626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑