Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1982638	1983276	639	69 [0]	[0] 56	otsA	trehalose‑6‑phosphate synthase

GCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACA  >  W3110S.gb/1982591‑1982637                                               | gCGAAAGAACAAGAACGCCCGGATTGTCTGGGTCCTGAGCAGCAACa  >  1:1134125/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:271649/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:477432/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:471601/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:455762/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:400382/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:391247/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:381425/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:373899/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:303584/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:495826/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:268088/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:266199/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:23698/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:224783/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:204630/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:188958/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1603667/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:735114/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:976744/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:95515/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:923924/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:87467/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:837105/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:80525/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:791534/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:779328/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:494596/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:733531/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:68862/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:596151/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:585546/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:564176/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:505399/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1584324/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1160996/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1293332/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1286710/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1255213/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:124840/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1217272/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1204556/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1200923/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1194864/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1311763/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1152939/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1142645/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1138556/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1132038/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1130858/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1057916/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1038690/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1431545/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1036102/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1569218/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1540992/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1512940/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:149630/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1483126/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:147147/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1442118/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1585329/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1397838/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1391117/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1371725/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1359078/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1353599/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1343769/1‑47 (MQ=255) gCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACa  >  1:1325427/1‑47 (MQ=255)                                               | GCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACA  >  W3110S.gb/1982591‑1982637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑