Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2001484	2002635	1152	97 [0]	[0] 47	[yedO]–[fliZ]	[yedO],fliY,[fliZ]

CTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGCC  >  W3110S.gb/2001422‑2001483                                                              | cTTCACGCAGCGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1231247/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGGGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:725548/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:419250/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:643555/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:617578/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:611611/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:570793/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:548479/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:544121/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:506397/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:4988/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:49286/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:449448/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:667775/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:403023/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:400659/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:38390/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:378224/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:351963/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:305128/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:303400/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:278918/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:265731/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:260414/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:255130/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:814539/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:995935/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:988854/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:937497/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:934781/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:919411/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:859126/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:831635/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:826765/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:823497/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:816532/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:815738/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:662400/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:786810/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:74849/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:737133/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:727260/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:72690/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:699233/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:686253/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:68282/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:671059/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:242054/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1197523/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1328628/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1319972/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1306609/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1282399/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1279877/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1265959/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1261546/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1259929/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1253504/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1239438/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1210814/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1209441/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1357075/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1186721/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1186606/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1158165/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1120343/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1097797/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1084785/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1080341/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1072158/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1037460/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1024093/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1001080/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1543332/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:226729/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:195347/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1650149/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1638469/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1635461/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1633868/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1594702/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1594585/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1579019/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1561131/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1000435/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1512567/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1490089/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1481675/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:142064/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1397171/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1389123/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1374380/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1362953/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:1362620/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTAACGTAATTTATTGCCGCCCATTGcc  >  1:1497309/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGATTACGTAATTTATTGCCGCCCATTGcc  >  1:280172/1‑62 (MQ=255) cTTCACGCAGAGCATCTGCCGAGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGcc  >  1:569915/1‑62 (MQ=255)                                                              | CTTCACGCAGAGCATCTGCCGCGAGAAATTCCAGCTTACGTAATTTATTGCCGCCCATTGCC  >  W3110S.gb/2001422‑2001483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑