Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2073957	2074406	450	15 [0]	[0] 56	flu	antigen 43 (Ag43) phase‑variable biofilm formation autotransporter

CAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGA  >  W3110S.gb/2073895‑2073956                                                              | cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGTGCCGGa  <  1:311140/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:1257388/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:1336315/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:1419489/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:1456973/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:191697/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:206222/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:354359/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:400705/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:55648/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:690600/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:74095/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:89539/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:922245/62‑1 (MQ=255) cAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGa  <  1:928743/62‑1 (MQ=255)                                                              | CAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGA  >  W3110S.gb/2073895‑2073956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑