Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2110116	2110997	882	38 [0]	[0] 28	[glf]–[rfbX]	[glf],[rfbX]

AATGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGC  >  W3110S.gb/2110054‑2110115                                                              | aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:702516/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1059156/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:466237/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:497989/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:587100/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:625249/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:630308/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:663002/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:688193/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:398517/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:724219/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:775087/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:785656/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:848447/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:882576/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:907484/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:941135/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:97464/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:33182/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1136575/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1177498/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1218708/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1265176/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1284730/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1302960/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1318067/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1428402/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1475109/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1554697/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1589432/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1613326/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:334823/62‑1 (MQ=255) aaTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCAGAGc  <  1:1313263/62‑1 (MQ=255)  aTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:735998/61‑1 (MQ=255)  aTGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1180736/61‑1 (MQ=255)       aTCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:249757/56‑1 (MQ=255)        tCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:1312746/55‑1 (MQ=255)                  ctccAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGc  <  1:623818/45‑1 (MQ=255)                                                              | AATGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTCTGAGC  >  W3110S.gb/2110054‑2110115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑