Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2126881	2127465	585	58 [0]	[0] 38	wcaI	predicted glycosyl transferase

ATGCCCGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACCG  >  W3110S.gb/2126820‑2126880                                                             | aTGCCCGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:997265/61‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTTCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:760172/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1036058/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:31958/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:323628/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:375568/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:38773/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:424811/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:428018/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:472168/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:516641/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:51811/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:541364/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:580957/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:589270/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:617978/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:625634/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:668428/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:725450/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:725585/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:736756/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:819873/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:858655/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:86767/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:921317/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:961266/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:963319/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:972418/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:146465/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1037955/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1064290/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1081396/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1144028/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1180190/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1219089/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:124292/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1285066/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1287775/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1327457/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1334482/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:28057/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1469580/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1481265/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1517532/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1567885/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1620871/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1641187/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:208626/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:212537/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:216731/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:269522/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:270421/58‑1 (MQ=255)    cccGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:273593/58‑1 (MQ=255)       ggAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:63833/55‑1 (MQ=255)                tCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1433520/46‑1 (MQ=255)                tCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1552451/46‑1 (MQ=255)                tCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:1234046/46‑1 (MQ=255)                     aaGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACcg  <  1:495323/41‑1 (MQ=255)                                                             | ATGCCCGGAAAGGTTTCGCAAAGCTGCCCCAGTTCTGTGTAGGCTTCAGCAGTAATCACCG  >  W3110S.gb/2126820‑2126880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑