Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2447515	2448410	896	73 [0]	[0] 22	trmC	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme

CAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGAA  >  W3110S.gb/2447453‑2447514                                                              | cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:558162/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:79083/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:771690/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:744902/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:719278/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:70973/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:665576/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:617414/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:569279/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:795429/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:549153/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:511444/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:481656/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:40151/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:310085/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:306773/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:294556/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1026166/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:90454/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:996871/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:988677/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:980481/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:954790/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:944391/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:93528/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:928327/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:91886/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:276613/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:895544/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:882278/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:868834/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:864513/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:858170/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:806413/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:801494/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1180773/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:132557/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1304189/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:210155/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1278493/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1231954/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:12301/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1195186/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1193979/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1281066/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1149522/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1146855/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1107557/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1102828/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1086336/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1076885/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:10582/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:153774/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:192787/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:176673/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1615030/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1613741/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1613271/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1588215/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1570161/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1337258/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1453135/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1444150/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1430329/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1392787/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1372090/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1350316/62‑1 (MQ=255) cAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1338534/62‑1 (MQ=255)  aGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:117876/61‑1 (MQ=255)  aGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:825404/61‑1 (MQ=255)  aGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:1102512/61‑1 (MQ=255)   gTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGaa  <  1:944991/60‑1 (MQ=255)                 aTCCGCAAGCGCAATTACAACGATTACATTTCATTAGTTTTGAGaa  <  1:853118/46‑1 (MQ=255)                                                              | CAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGAA  >  W3110S.gb/2447453‑2447514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑