Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2488393	2488473	81	58 [0]	[0] 10	emrK	EmrKY‑TolC multidrug resistance efflux pump, membrane fusion protein component

AAATAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGA  >  W3110S.gb/2488341‑2488392                                                    | aaaTAACCCCCTGCTTCGCTAACTGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1642708/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:598248/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:317936/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:33907/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:35363/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:354770/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:381538/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:382001/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:422024/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:440554/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:456006/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:465725/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:475460/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:57451/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:581382/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:245495/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:61586/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:721508/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:746582/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:805810/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:81350/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:82975/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:840121/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:879363/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:880795/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:885704/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:944194/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:959277/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:973013/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1526084/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1016646/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:102084/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1022177/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1103110/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1124021/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1219947/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1267270/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1272877/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:128357/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1287620/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1369671/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1474005/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1484136/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1505488/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1013767/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1557963/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1570709/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1582709/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1606559/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1613360/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1629162/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:163849/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:1641101/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:166291/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:175433/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:182553/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGa  >  1:193954/1‑52 (MQ=255) aaaTAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAAACTTCTAAAGa  >  1:263838/1‑52 (MQ=255)                                                    | AAATAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGA  >  W3110S.gb/2488341‑2488392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑