Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2539771	2539883	113	16 [0]	[0] 88	ptsI	PEP‑protein phosphotransferase of PTS system

TGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGC  >  W3110S.gb/2539709‑2539770                                                              | tGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTTCTCGAAGATGAGGTGCTGGAGc  <  1:1233577/62‑1 (MQ=255) tGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:1369436/62‑1 (MQ=255) tGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:1393501/62‑1 (MQ=255) tGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:1439988/62‑1 (MQ=255) tGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:1527000/62‑1 (MQ=255) tGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:1596696/62‑1 (MQ=255) tGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:19036/62‑1 (MQ=255) tGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:618579/62‑1 (MQ=255) tGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:629511/62‑1 (MQ=255) tGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:8914/62‑1 (MQ=255)  gaagaaAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:403950/61‑1 (MQ=255)  gaagaaAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:871068/61‑1 (MQ=255)  gaagaaAAAGAAGCCATCTTTGAAGGGCACATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:335384/61‑1 (MQ=255)               ccATCTTTGACGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:1049668/48‑1 (MQ=255)               ccATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:918947/48‑1 (MQ=255)                cATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGc  <  1:1460743/47‑1 (MQ=255)                                                              | TGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGC  >  W3110S.gb/2539709‑2539770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑