Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2546004	2547352	1349	15 [0]	[0] 49	[cysA]–[cysU]	[cysA],cysW,[cysU]

TCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCGG  >  W3110S.gb/2545944‑2546003                                                            | tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:1076087/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:1078890/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:1228511/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:1297562/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:1403422/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:1586334/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:36321/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:449072/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:470913/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:52983/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:728061/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:755266/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:761572/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:779164/1‑60 (MQ=255) tCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCgg  >  1:920162/1‑60 (MQ=255)                                                            | TCGCGACGCGGCAGCACCGTCAGGCCAAAAGCGATATTGTCGAACACCGTCATATGGCGG  >  W3110S.gb/2545944‑2546003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑