Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2669141	2669309	169	39 [0]	[0] 56	hcaF	3‑phenylpropionate dioxygenase, small (beta) subunit

CGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTG  >  W3110S.gb/2669079‑2669140                                                              | cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:674520/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:437121/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:528934/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:542408/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:599992/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:602504/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:608336/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:641193/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:659058/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:669978/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:394983/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:696782/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:750648/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:77174/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:774306/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:788670/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:834140/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:888684/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:952792/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:982339/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:1395851/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:1128720/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:1157921/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:117177/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:1264893/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:1293101/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:1300492/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:1331505/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:1356512/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:1060011/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:1416113/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:1458115/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:1584278/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:180849/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:2162/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:233951/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:313500/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGActg  >  1:373223/1‑62 (MQ=255) cGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATATCGTGActg  >  1:1143588/1‑62 (MQ=255)                                                              | CGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTG  >  W3110S.gb/2669079‑2669140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑