Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2843993	2844252	260	45 [0]	[0] 149	hycE	hydrogenase 3, large subunit

GTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCA  >  W3110S.gb/2843931‑2843992                                                              | gttaCCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:189100/59‑1 (MQ=255) gggACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1505833/60‑1 (MQ=255) gTGACCGCTGGCACGTACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:427111/62‑1 (MQ=255) gTGACCGCTGGCACGGACCTTCGCGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1407178/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:64023/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:206017/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:269647/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:291787/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:297202/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:338272/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:515646/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:965441/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:649304/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:658531/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:661169/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:732901/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:741281/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:8064/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:933028/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:941228/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:951070/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1010157/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1369272/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1039588/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1052766/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1057853/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1179834/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1197706/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1249964/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1256140/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:131148/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:179430/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1371135/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:141239/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1441892/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1493347/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1541311/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1627187/62‑1 (MQ=255) gTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:166825/62‑1 (MQ=255)     ccGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:745672/58‑1 (MQ=255)        cTGGCACGTACCATCGGGCGGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:649665/55‑1 (MQ=255)        cTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1479041/55‑1 (MQ=255)                     tCGGGCCGACGTTACTTAAGTCGCGAGCGATTTCCGGGTCCa  <  1:251731/42‑1 (MQ=255)                        ggCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:613740/39‑1 (MQ=255)                         gCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCa  <  1:1119327/38‑1 (MQ=255)                                                              | GTGACCGCTGGCACGGACCATCGGGCCGACGTTACTGAAGTCGCGAGCGATTTCCGGGTCCA  >  W3110S.gb/2843931‑2843992

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑