Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2900960	2901470	511	67 [0]	[0] 21	ygcE	predicted kinase

ACCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAG  >  W3110S.gb/2900898‑2900959                                                              | aCCCTGACGTGGCATATGTCCCCTCTGTTTCGGGTTATCTGACGCATCGCTTACCCGGCGAg  >  1:477033/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAATCGGCGAg  >  1:265296/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:482339/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:578663/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:575894/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:571459/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:557240/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:550707/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:535092/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:533177/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:514397/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:667793/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:468339/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:44903/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:436168/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:403067/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:39756/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:8697/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:984208/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:96316/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:946455/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:935928/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:933719/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:898427/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:894574/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:869856/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:27906/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:845238/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:842378/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:835972/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:800174/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:786619/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:765679/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:694902/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1198429/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1266630/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1259802/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1252734/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1243206/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:123992/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1235524/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1223440/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:121475/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:104849/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1160848/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1146022/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1141990/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1116274/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:110702/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1075085/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1055918/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1321105/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1329343/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1334386/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1486100/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1515640/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1526087/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1535319/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1552461/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:1591850/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:222806/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:24095/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:241089/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:245101/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:256825/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAg  >  1:301010/1‑62 (MQ=255) aCCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTCACGCATCGCTTAACCGGCGAg  >  1:1302394/1‑62 (MQ=255)                                                              | ACCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAG  >  W3110S.gb/2900898‑2900959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑