Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2906496	2906553	58	89 [0]	[0] 24	eno	enolase

TTCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGC  >  W3110S.gb/2906457‑2906495                                       | ttCATGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:948481/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:499251/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:676626/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:653148/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:616048/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:601621/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:588659/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:582974/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:582600/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:581029/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:544695/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:538840/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:530850/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:74498/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:496219/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:494271/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:49116/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:453151/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:443165/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:431624/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:416393/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:413115/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:406450/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:84415/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:996901/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:995035/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:973648/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:966055/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:95567/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:948826/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:93893/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:924148/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:914433/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:891916/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:677626/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:833239/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:824130/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:819294/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:803859/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:80044/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:795767/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:786303/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:759246/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:758388/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:387681/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1155427/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1396964/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1394227/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1358016/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1325139/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1313442/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1280021/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1262615/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1241224/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:123488/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1222741/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1436427/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1154007/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1141472/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1136551/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1131331/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1123522/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1114342/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:110299/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1081109/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1072996/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1046101/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:23533/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:343893/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:337642/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:316731/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:305339/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:289266/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:28803/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:287932/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:266137/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:264239/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:243449/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1021558/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:233406/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:2312/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:167285/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1605886/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:159847/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1510319/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1494265/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1481150/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1466000/1‑39 (MQ=255) ttCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGc  >  1:1465738/1‑39 (MQ=255)                                       | TTCACGGGAACCAGTAGAAGCACCTGACGGAGCAGCTGC  >  W3110S.gb/2906457‑2906495

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑