Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3163572	3163707	136	79 [1]	[0] 77	parC	DNA topoisomerase IV, subunit A

GCGCTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGCGGCGGAAC  >  W3110S.gb/3163514‑3163574                                                          |    gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCg‑ggcgg     >  1:1077145/1‑57 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:452089/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:642503/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:60501/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:559690/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:496592/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:484191/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:46930/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:469209/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:46375/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:455164/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:664618/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:43617/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:395940/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:388129/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:379608/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:378012/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:361257/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:352712/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:332766/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:812662/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:991534/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:971867/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:970475/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:958989/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:935768/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:91619/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:909813/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:881487/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:8637/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:660368/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:812605/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:801903/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:792228/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:790227/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:750129/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:736631/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:699136/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:321508/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1231260/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1021640/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1349103/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1319274/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1311416/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1302399/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1292076/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:128671/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1284571/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1275865/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1358510/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1218570/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1202940/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:116749/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1138107/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1070692/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1058142/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1047769/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1040606/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1431318/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:275495/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:26876/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:212327/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:177227/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1623511/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1578936/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1576428/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1557373/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:15560/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1554977/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1534973/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1517991/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1500976/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1454871/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1433290/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1425668/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGaggcgg     >  1:813162/1‑58 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGCGGCGGAac  >  1:518015/1‑61 (MQ=255) gcgcTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGAGGCGCACGGTATCGcggcgg     >  1:171600/1‑58 (MQ=255) gcgcTTGAGGACTTTATCCAGACGATAGTTAAGTCGGCGGCGCACGGTATCGcggcgg     >  1:1267391/1‑58 (MQ=39)                                                          |    GCGCTTGAGGACTTTCTCCAGACGATAGTTCAGTCGGCGGCGCACGGTATCGCGGCGGAAC  >  W3110S.gb/3163514‑3163574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑