Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3179431	3179720	290	99 [0]	[0] 57	ygiC	hypothetical protein

CGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGCC  >  W3110S.gb/3179387‑3179430                                            | cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:418125/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:564082/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:558276/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:551932/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:539935/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:511948/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:498635/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:496950/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:482563/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:482292/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:443184/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:442811/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:42709/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:579971/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:398300/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:391807/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:391228/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:387134/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:376663/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:367217/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:350608/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:305635/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:279050/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:269189/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:263189/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:784901/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:985587/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:975667/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:963052/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:947841/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:944433/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:943988/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:935746/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:93094/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:845950/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:821255/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:818979/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:789077/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:263092/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:782070/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:756538/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:742626/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:704770/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:699685/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:675953/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:671238/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:670529/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:642485/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:610569/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:591251/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1235263/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:140188/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1392258/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1376496/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1375330/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1369940/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1353910/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1340439/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1330072/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1309500/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1291529/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1283577/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1274914/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1436564/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1205819/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1196914/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1186035/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1180501/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1175674/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1165382/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1155201/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1119100/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1109339/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1085577/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1072476/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1633113/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:260649/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:230196/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:226740/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:208842/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:202878/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:179651/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:164244/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:163928/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1636012/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1635356/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1634071/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1019410/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1620741/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1589769/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1587989/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:156955/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1565219/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1558807/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1550582/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1546904/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1530036/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1491974/1‑44 (MQ=255) cGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGcc  >  1:1489476/1‑44 (MQ=255)                                            | CGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGCC  >  W3110S.gb/3179387‑3179430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑