Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3288044	3288529	486	104 [0]	[0] 46	yraI	predicted periplasmic pilin chaperone

GGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAT  >  W3110S.gb/3288530‑3288591 |                                                              ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAGGAACGTGAAATGGGCTGCGAt  <  1:975854/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:779053/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:441638/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:453292/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:456708/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:593937/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:638174/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:680173/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:703600/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:710498/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:733065/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:735031/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:758100/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:369173/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:805823/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:827914/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:837863/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:876918/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:883254/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:892355/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:895423/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:983048/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:989234/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1481649/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:100787/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1062275/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1112809/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1156353/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1332158/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1342460/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1356937/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1429920/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1470259/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1479595/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:100773/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1495229/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1578785/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:1610284/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:163822/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:167374/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:196250/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:220419/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:245060/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:266353/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAt  <  1:35599/62‑1 (MQ=255) ggAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGAGAAATGGGCTGCGAt  <  1:1216278/62‑1 (MQ=255) |                                                              GGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGAT  >  W3110S.gb/3288530‑3288591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑