Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3317295	3317356	62	64 [0]	[0] 30	nusA	transcription termination/antitermination L factor

CTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTG  >  W3110S.gb/3317357‑3317417 |                                                             cTACAGCCAAATTTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:267558/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:98827/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1157016/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:941821/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:916283/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:867650/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:833855/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:809972/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:726077/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:679032/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:652730/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:640981/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:614437/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:515838/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:398069/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:295378/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:201026/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1621653/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1587483/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1475251/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1418501/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1284767/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1258440/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:125306/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1244701/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1219860/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1203181/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1196131/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1166499/61‑1 (MQ=255) cTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTg  <  1:1164904/61‑1 (MQ=255) |                                                             CTACAGCCAAAATTTCTTTGTTCATCGCGGGCTTTTCACCTCATCCAGACTATTAAAAGTG  >  W3110S.gb/3317357‑3317417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑