Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3450335	3450338	4	49 [0]	[0] 84	rpoC	RNA polymerase, beta prime subunit

GATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGCGAC  >  W3110S.gb/3450339‑3450400 |                                                              gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTa                           >  1:624276/1‑37 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGCCCGcgac  >  1:1546755/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGCCCGcgac  >  1:176639/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACcgcgcc  >  1:1276038/1‑60 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACcgcg    >  1:200531/1‑60 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACcgc     >  1:363374/1‑59 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:559394/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:637095/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:632562/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:624282/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:623374/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:595600/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:57577/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:425346/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:531441/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:526917/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:504857/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:465010/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:4478/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:442278/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:437551/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:425639/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:382452/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:770051/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:976747/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:961586/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:953118/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:950076/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:928416/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:908770/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:859905/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:849030/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:80501/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:775335/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:645989/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:769898/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:766193/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:747110/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:726655/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:720666/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:707038/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:682974/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:661777/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:654179/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1268868/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1590286/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1535951/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1499546/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1457150/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:14271/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1378126/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1304421/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1281/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1020187/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1204165/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1203069/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1203067/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1184404/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1174723/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1169775/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1164884/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:113125/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1592074/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1629317/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:183891/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:236284/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:409949/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:370736/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:370565/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:237224/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:258938/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:292035/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:296705/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:30077/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:312608/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:33026/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:334740/1‑62 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgaa  >  1:105280/1‑61 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcga   >  1:1341098/1‑61 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcga   >  1:936162/1‑61 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcga   >  1:1093014/1‑61 (MQ=255) gATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcga   >  1:1619886/1‑61 (MQ=255) gATCATGTCGGCCAAAGATTTAAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:1364843/1‑62 (MQ=255) gATCATGTCGGCCAAAGAATTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGcgac  >  1:603361/1‑62 (MQ=255) |                                                              GATCATGTCGGCCAAAGATTTCAGAGGACGCTTGTTAGAACCGGTGATCGCACGACCGCGAC  >  W3110S.gb/3450339‑3450400

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑