Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3499790	3499914	125	11 [0]	[0] 83	yijE	predicted permease

AGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACCACA  >  W3110S.gb/3499915‑3499977 |                                                               aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCgacgac   >  1:1502593/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:39121/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:555109/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:52666/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:489943/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:466844/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:460820/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:457976/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:437026/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:398324/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:556778/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:36837/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:354557/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:321071/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:31824/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:31388/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:283163/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:27557/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:269127/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1020405/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:725163/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:995837/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:952020/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:913636/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:845911/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:809667/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:808554/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:801861/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:784760/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:77913/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:260504/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:704995/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:66380/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:659664/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:656334/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:636026/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:627237/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:615476/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:610430/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1230513/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1414805/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:204237/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1390341/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1336117/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1300483/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1295838/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1284385/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1283714/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1243852/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1241084/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:140712/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1197802/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1175048/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1133029/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1075683/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1062795/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1044253/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1039643/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1037017/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1021725/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1418375/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1644277/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1640843/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1635794/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1625934/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1583171/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:155414/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1549460/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1502655/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1439031/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1432526/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1423691/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACcac   >  1:1423426/1‑62 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACca    >  1:387770/1‑61 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACca    >  1:435088/1‑61 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACca    >  1:1589207/1‑61 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACca    >  1:1324000/1‑61 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACca    >  1:903806/1‑61 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACca    >  1:498791/1‑61 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACca    >  1:919905/1‑61 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACca    >  1:200624/1‑61 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACca    >  1:232844/1‑61 (MQ=255) aGCGCCCAGAACACGGTGGGCTGCCAGT‑AATTTCACGTTGCGGCACCAGTAAAGCGACcaca  >  1:1540168/1‑62 (MQ=255) |                                                               AGCGCCCAGAACACGGTGGGCTGCCAGTCAATTTCACGTTGCGGCACCAGTAAAGCGACCACA  >  W3110S.gb/3499915‑3499977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑