Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3532884	3533895	1012	11 [0]	[0] 7	[cpxA]–yiiM	[cpxA],yiiM

ATATTTATTTTATGTCAGGCGTGCTGTTTTCGCGGTAAGTATCCAGGCAGGAACTCAATAGC  >  W3110S.gb/3533896‑3533957 |                                                              atatTTATTTTATGTCAGGCGTGCTGTTTTCGCGGTAAGTATCCAGGCAGGAACTCAATAGc  <  1:1632905/62‑1 (MQ=255) atatTTATTTTATGTCAGGCGTGCTGTTTTCGCGGTAAGTATCCAGGCAGGAACTCAATAGc  <  1:258945/62‑1 (MQ=255) atatTTATTTTATGTCAGGCGTGCTGTTTTCGCGGTAAGTATCCAGGCAGGAACTCAATAGc  <  1:316087/62‑1 (MQ=255) atatTTATTTTATGTCAGGCGTGCTGTTTTCGCGGTAAGTATCCAGGCAGGAACTCAATAGc  <  1:337040/62‑1 (MQ=255) atatTTATTTTATGTCAGGCGTGCTGTTTTCGCGGTAAGTATCCAGGCAGGAACTCAATAGc  <  1:36305/62‑1 (MQ=255) atatTTATTTTATGTCAGGCGTGCTGTTTTCGCGGTAAGTATCCAGGCAGGAACTCAATAGc  <  1:526778/62‑1 (MQ=255) atatTTATTTTATGTCAGGCGTGCTGTTTTCGCGGTAAGTATCCAGGCAGGAACTCAATAGc  <  1:616259/62‑1 (MQ=255) |                                                              ATATTTATTTTATGTCAGGCGTGCTGTTTTCGCGGTAAGTATCCAGGCAGGAACTCAATAGC  >  W3110S.gb/3533896‑3533957

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑