Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3578823	3580067	1245	12 [0]	[0] 40	[glnA]	[glnA]

GCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAT  >  W3110S.gb/3580068‑3580107 |                                        gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:797414/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:100991/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:436457/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:436845/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:459617/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:486645/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:638362/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:648160/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:678509/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:734827/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:339856/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:801941/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:853946/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:867159/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:912931/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:913059/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:933249/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:954209/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:985945/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:995477/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1620239/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:106009/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1083142/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1146670/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1150874/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1180177/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1204422/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1222148/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1241031/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1310791/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1374407/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1484891/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1532985/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1535936/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1588403/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1608194/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1612963/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAt  <  1:1621228/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCTGTCTCAGGCAGGCCTGGGAt  <  1:1345479/40‑1 (MQ=255) gCCGTGGAAACTTTTCGCCCGTCTCTGGCAGGCCTGGGAt  <  1:520168/40‑1 (MQ=255) |                                        GCCGTGGAAACTTTTCGCCTGTCTCTGGCAGGCCTGGGAT  >  W3110S.gb/3580068‑3580107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑