Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3838323	3838329	7	32 [0]	[0] 55	rfaI	UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase

AGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACT  >  W3110S.gb/3838330‑3838390 |                                                             aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATaaa                     >  1:124472/1‑42 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAATGCATTAAAACTGGGAAACt  >  1:904630/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCCTTAAAACTGGGAAAc   >  1:1539590/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTggg       >  1:1580034/1‑56 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGaa     >  1:503772/1‑58 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:842427/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:1571985/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:1487738/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:466559/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:195672/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:1393793/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:134651/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:133540/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:1173362/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:1139698/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:442781/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:1103499/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:971197/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:977413/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAAc   >  1:418722/1‑60 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:608003/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:461588/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:446528/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:485561/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:439118/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:485853/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:488207/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:531895/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:193563/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:75474/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:931808/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:950872/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:990487/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:993501/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1413893/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1024785/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1039420/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1071696/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1082479/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1118250/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:111871/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1140972/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1249419/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1398731/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1411115/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:420538/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1477648/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1554938/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:171550/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:192272/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:1005156/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:247060/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:255513/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:346669/1‑61 (MQ=255) aGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACt  >  1:359472/1‑61 (MQ=255) |                                                             AGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAAAACTGGGAAACT  >  W3110S.gb/3838330‑3838390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑