Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3839738	3839768	31	23 [0]	[0] 8	rfaY	lipopolysaccharide core biosynthesis protein

GGCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGAT  >  W3110S.gb/3839769‑3839829 |                                                             ggCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGAt  <  1:1076127/61‑1 (MQ=255) ggCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGAt  <  1:115888/61‑1 (MQ=255) ggCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGAt  <  1:1502192/61‑1 (MQ=255) ggCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGAt  <  1:1649200/61‑1 (MQ=255) ggCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGAt  <  1:236125/61‑1 (MQ=255) ggCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGAt  <  1:643371/61‑1 (MQ=255) ggCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGAt  <  1:811823/61‑1 (MQ=255) ggCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTAAt  <  1:1256591/61‑1 (MQ=255) |                                                             GGCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGAT  >  W3110S.gb/3839769‑3839829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑