Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3901451	3901503	53	8 [0]	[0] 57	malS	alpha‑amylase

GTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCC  >  W3110S.gb/3901504‑3901564 |                                                             gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:67642/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:410092/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:445016/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:450499/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:452093/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:509081/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:510008/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:535517/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:555519/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:556100/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:589584/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:634215/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:654631/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:663546/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:666613/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1020263/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:684958/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:70691/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:71020/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:753126/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:772514/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:774526/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:7842/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:802688/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:86232/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:868731/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:887213/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:962893/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:990178/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1307919/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1012259/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1021461/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1038685/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1061401/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1086190/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1115722/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:111615/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1168306/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1197285/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1235600/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1272441/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1282542/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1285058/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1361188/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1392642/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1453778/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:145595/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1548030/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1584176/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1604162/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1614841/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:1636478/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:169140/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:201480/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:273246/61‑1 (MQ=255) gTTGCTGCCAGGCGGGCAACCCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:405014/61‑1 (MQ=255) gTTGCTGACAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATccc  <  1:307454/61‑1 (MQ=255) |                                                             GTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCC  >  W3110S.gb/3901504‑3901564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑