Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3962962	3963094	133	89 [0]	[0] 43	yhjG	predicted outer membrane biogenesis protein

CACCACCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCGG  >  W3110S.gb/3963095‑3963152 |                                                          caccacCGGAAAGCCACGACCAAAACTGGACGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:769094/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:6716/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:466880/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:485624/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:504293/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:546682/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:581344/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:587529/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:625955/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:631253/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:66435/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:670710/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:42829/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:680539/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:681812/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:692208/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:776166/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:873687/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:884830/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:90906/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:91172/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:947012/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1431658/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1040688/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:112157/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1241350/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1245639/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1258957/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1278038/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1287109/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1293147/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1352748/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1409074/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1010352/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1549400/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1616613/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:1636933/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:197948/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:206410/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:260404/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:295099/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:351271/58‑1 (MQ=255) caccacCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCgg  <  1:408863/58‑1 (MQ=255) |                                                          CACCACCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCGG  >  W3110S.gb/3963095‑3963152

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑