Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3971332	3971336	5	10 [0]	[0] 58	yhjA	predicted cytochrome C peroxidase

GCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGAAAA  >  W3110S.gb/3971337‑3971398 |                                                              gCCGATGTTCAGTCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1059465/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:675194/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:273623/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:30265/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:303833/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:369756/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:370039/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:398297/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:424122/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:426839/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:446797/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:456104/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:535701/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:636749/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:665123/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:671926/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:210797/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:696856/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:704258/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:715671/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:736071/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:758494/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:768827/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:81506/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:843532/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:851714/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:86528/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:954323/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:966065/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:981916/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1246249/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1045652/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1057236/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1072449/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1110969/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1118202/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1127676/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1131810/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1147677/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1207301/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1209583/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1221061/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:12390/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1021909/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1281848/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1311427/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1314016/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1365138/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1469534/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1478023/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:148208/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1497115/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1529111/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1549345/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:15521/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1609732/62‑1 (MQ=255) gCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1616086/62‑1 (MQ=255) gCCGATGTTAAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGaaaa  <  1:1047332/62‑1 (MQ=255) |                                                              GCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGAAAA  >  W3110S.gb/3971337‑3971398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑